You are viewing the site in preview mode

Skip to main content

Table 8 Results of the sequence homology analysis for all the variants with r2 ≥ 0.7 from linkage disequilibrium analysis

From: A major QTL at the LHCGR/FSHR locus for multiple birth in Holstein cattle

Variant on chromosome 11a Homolog region for human genomeb r2c Homology scored
31,246,990AGCC>- 2:48,957,377 0.707 0.071
31,089,325C>G 2:48,806,473 0.856 0
31,216,357C>T 2:48,930,243 0.705 0
31,248,462G>A 2:48,957,970 0.720 0
31,248,573C>T 2:48,957,971 0.706 0
31,248,580G>T 2:48,957,971 0.706 0
  1. aBased on the cattle assembly ASR-UCD1.2/bosTau9
  2. bUsing the USCS genome browser and human assembly GRCh38/hg38
  3. cFrom a previous linkage disequilibrium analysis with top-associated haplotype
  4. dSequence homology between 20 mammalian species using the UCSC genome browser, score range from 0 to 1