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|
Chromosome
|
Average ROH (%)
|
|---|
|
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
|---|
|
1
|
10.08
|
12.67
|
14.89
|
15.05
|
13.59
|
13.58
|
7.35
|
11.34
|
|
2
|
9.40
|
11.67
|
13.89
|
14.08
|
12.02
|
12.02
|
8.62
|
10.74
|
|
3
|
9.18
|
11.07
|
12.66
|
12.74
|
12.27
|
12.24
|
10.02
|
9.11
|
|
4
|
10.09
|
12.27
|
13.82
|
13.99
|
13.16
|
13.17
|
11.50
|
10.61
|
|
5
|
10.38
|
12.28
|
14.28
|
14.46
|
13.06
|
13.05
|
10.62
|
11.10
|
|
6
|
8.30
|
10.34
|
12.58
|
12.69
|
10.57
|
10.57
|
8.21
|
10.23
|
|
7
|
10.41
|
12.23
|
14.29
|
14.48
|
13.12
|
13.07
|
9.53
|
9.58
|
|
8
|
8.61
|
10.07
|
11.02
|
11.05
|
10.43
|
10.45
|
11.73
|
8.93
|
|
9
|
9.25
|
10.88
|
12.90
|
13.05
|
11.67
|
11.65
|
10.15
|
8.94
|
|
10
|
9.90
|
12.09
|
14.11
|
14.29
|
13.05
|
13.05
|
11.04
|
9.87
|
|
11
|
9.29
|
11.00
|
12.81
|
12.84
|
11.73
|
11.70
|
11.76
|
8.21
|
|
12
|
11.10
|
12.76
|
14.74
|
14.79
|
12.77
|
12.73
|
15.28
|
11.02
|
|
13
|
12.96
|
14.70
|
15.64
|
15.76
|
14.43
|
14.43
|
14.28
|
13.06
|
|
14
|
8.96
|
10.81
|
12.24
|
12.34
|
11.34
|
11.31
|
9.85
|
9.81
|
|
15
|
10.40
|
12.08
|
13.36
|
13.52
|
12.66
|
12.68
|
11.43
|
10.96
|
|
16
|
13.10
|
15.72
|
17.43
|
17.58
|
16.45
|
16.45
|
12.72
|
14.17
|
|
17
|
9.19
|
10.88
|
11.94
|
12.01
|
10.65
|
10.63
|
12.94
|
10.72
|
|
18
|
7.23
|
8.74
|
9.78
|
9.84
|
8.80
|
8.81
|
9.56
|
8.30
|
|
19
|
9.95
|
12.08
|
13.04
|
13.19
|
11.51
|
11.53
|
13.29
|
11.15
|
|
20
|
8.11
|
9.66
|
11.44
|
11.54
|
9.69
|
9.69
|
8.43
|
9.91
|
|
21
|
9.86
|
11.69
|
12.67
|
12.68
|
11.36
|
11.36
|
13.65
|
11.23
|
|
22
|
11.34
|
13.04
|
13.89
|
13.96
|
12.34
|
12.32
|
16.26
|
12.59
|
|
23
|
8.29
|
9.58
|
10.42
|
10.58
|
9.16
|
9.22
|
14.82
|
8.78
|
|
24
|
10.13
|
11.70
|
12.87
|
12.89
|
11.20
|
11.19
|
15.51
|
11.28
|
|
25
|
12.33
|
13.44
|
13.87
|
13.88
|
12.24
|
12.45
|
19.26
|
12.93
|
|
26
|
12.48
|
14.68
|
15.46
|
15.56
|
12.97
|
12.98
|
16.99
|
14.06
|
|
27
|
11.11
|
12.65
|
13.64
|
13.59
|
12.01
|
12.00
|
18.84
|
12.35
|
|
28
|
10.02
|
11.60
|
12.39
|
12.44
|
10.91
|
10.97
|
14.89
|
11.07
|
|
29
|
11.28
|
12.96
|
14.24
|
14.40
|
12.45
|
12.43
|
17.81
|
12.05
|
|
30
|
11.43
|
13.11
|
14.24
|
14.48
|
11.08
|
11.08
|
23.12
|
12.27
|
|
31
|
14.51
|
17.03
|
18.55
|
18.82
|
16.25
|
16.25
|
22.79
|
16.81
|
- A = 50snp_500 kb _100snp_0_0; B = 50snp_500 kb _100snp_0_2; C = 50snp_500 kb _100snp_1_2; D = 50snp_500 kb _100snp_1_5; E = 50snp_500 kb _15snp_0_1; F = 50snp_500 kb _50snp_0_1; G = 500snp_500 kb _50snp_0_1; H = pruned_50snp_500 kb _50snp_0_1 (FORMAT: “sliding window size”_”minimum length (kb) for a run to be called as a ROH”_”minimum number of SNPs for a run to be called as a ROH”_”number of heterozygous SNPs allowed in a ROH”_”number of missing calls allowed in a ROH”)
