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Table 3 Pearson correlations between − log10 p values of the three models for direct and indirect SNP effects for each cross

From: The genetic architecture of socially-affected traits: a GWAS for direct and indirect genetic effects on survival time in laying hens showing cannibalism

Effect Cross STM-RMM.t STM-GLMM RMM.t-GLMM
Direct W1 * WA 0.98 0.96 0.97
W1 * WB 0.97 0.93 0.93
W1 * WC 0.96 0.96 0.93
Indirect W1 * WA 0.98 0.95 0.96
W1 * WB 0.98 0.97 0.96
W1 * WC 0.97 0.97 0.96
  1. All standard errors were less than 0.01
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Genetics Selection Evolution

ISSN: 1297-9686